Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Hbb-b1P02088 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC9.89□□□□□ -0.83
Hbb-b1P02088 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC9.89□□□□□ -0.83
Hbb-b1P02088 Arhgef4-208ENSMUST00000211073 171 ntBASIC9.89□□□□□ -0.83
Hbb-b1P02088 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hbb-b1P02088 Gm5939-201ENSMUST00000119613 2874 ntBASIC9.89□□□□□ -0.83
Hbb-b1P02088 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Gm8749-201ENSMUST00000117737 331 ntBASIC9.88□□□□□ -0.83
Hbb-b1P02088 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Hbb-b1P02088 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC9.88□□□□□ -0.83
Hbb-b1P02088 AC122024.2-201ENSMUST00000220086 871 ntBASIC9.88□□□□□ -0.83
Hbb-b1P02088 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Nudt18-202ENSMUST00000228554 3619 ntBASIC9.88□□□□□ -0.83
Hbb-b1P02088 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Gm28386-201ENSMUST00000189147 1849 ntBASIC9.88□□□□□ -0.83
Hbb-b1P02088 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 AC116503.1-201ENSMUST00000215445 2192 ntBASIC9.88□□□□□ -0.83
Hbb-b1P02088 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Gm42706-201ENSMUST00000199733 1910 ntBASIC9.88□□□□□ -0.83
Hbb-b1P02088 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Hbb-b1P02088 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Hbb-b1P02088 Gm6159-201ENSMUST00000191249 1724 ntBASIC9.87□□□□□ -0.83
Hbb-b1P02088 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hbb-b1P02088 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hbb-b1P02088 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hbb-b1P02088 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
Hbb-b1P02088 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Hbb-b1P02088 Gm43417-201ENSMUST00000201586 5207 ntBASIC9.87□□□□□ -0.83
Hbb-b1P02088 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Hbb-b1P02088 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hbb-b1P02088 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hbb-b1P02088 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hbb-b1P02088 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hbb-b1P02088 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms