Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.9□□□□□ -0.34
P01852 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
P01852 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
P01852 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.9□□□□□ -0.34
P01852 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
P01852 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
P01852 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Mir125a-201ENSMUST00000083545 68 ntBASIC12.9□□□□□ -0.34
P01852 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
P01852 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.9□□□□□ -0.34
P01852 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.9□□□□□ -0.34
P01852 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P01852 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
P01852 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
P01852 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
P01852 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P01852 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P01852 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P01852 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
P01852 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P01852 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P01852 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P01852 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.89□□□□□ -0.35
P01852 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.89□□□□□ -0.35
P01852 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P01852 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.89□□□□□ -0.35
P01852 Shd-206ENSMUST00000225145 998 ntBASIC12.89□□□□□ -0.35
P01852 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.89□□□□□ -0.35
P01852 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P01852 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P01852 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
P01852 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.89□□□□□ -0.35
P01852 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P01852 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P01852 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P01852 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
P01852 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
P01852 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
P01852 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Mir1897-201ENSMUST00000122581 272 ntBASIC12.88□□□□□ -0.35
P01852 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Gm27306-201ENSMUST00000183970 107 ntBASIC12.88□□□□□ -0.35
P01852 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.88□□□□□ -0.35
P01852 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.88□□□□□ -0.35
P01852 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
P01852 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
P01852 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
P01852 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
P01852 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.88□□□□□ -0.35
P01852 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.88□□□□□ -0.35
P01852 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P01852 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.87□□□□□ -0.35
P01852 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.87□□□□□ -0.35
P01852 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.87□□□□□ -0.35
P01852 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P01852 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.87□□□□□ -0.35
P01852 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms