Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Gm37935-201ENSMUST00000192012 982 ntBASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Gm37714-201ENSMUST00000194742 342 ntBASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Gm43575-201ENSMUST00000196420 516 ntBASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Igh-VJ558P01758 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Gm27533-201ENSMUST00000183800 152 ntBASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.17□□□□□ -0.46
Igh-VJ558P01758 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igh-VJ558P01758 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Gm27622-201ENSMUST00000183779 60 ntBASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Shd-206ENSMUST00000225145 998 ntBASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igh-VJ558P01758 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms