Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CcnkO88874 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.56□□□□□ -0.4
CcnkO88874 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
CcnkO88874 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.56□□□□□ -0.4
CcnkO88874 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.56□□□□□ -0.4
CcnkO88874 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.56□□□□□ -0.4
CcnkO88874 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
CcnkO88874 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.56□□□□□ -0.4
CcnkO88874 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CcnkO88874 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CcnkO88874 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
CcnkO88874 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.56□□□□□ -0.4
CcnkO88874 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.55□□□□□ -0.4
CcnkO88874 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
CcnkO88874 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CcnkO88874 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.55□□□□□ -0.4
CcnkO88874 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.55□□□□□ -0.4
CcnkO88874 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.55□□□□□ -0.4
CcnkO88874 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CcnkO88874 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.55□□□□□ -0.4
CcnkO88874 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.55□□□□□ -0.4
CcnkO88874 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
CcnkO88874 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CcnkO88874 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.55□□□□□ -0.4
CcnkO88874 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CcnkO88874 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CcnkO88874 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CcnkO88874 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CcnkO88874 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
CcnkO88874 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.54□□□□□ -0.4
CcnkO88874 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.54□□□□□ -0.4
CcnkO88874 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.54□□□□□ -0.4
CcnkO88874 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.54□□□□□ -0.4
CcnkO88874 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.54□□□□□ -0.4
CcnkO88874 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.54□□□□□ -0.4
CcnkO88874 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
CcnkO88874 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
CcnkO88874 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CcnkO88874 Grk6-205ENSMUST00000224653 2976 ntBASIC12.54□□□□□ -0.4
CcnkO88874 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CcnkO88874 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms