Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.52□□□□□ -0.25
Hcn1O88704 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Hcn1O88704 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hcn1O88704 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.52□□□□□ -0.25
Hcn1O88704 Gm38225-201ENSMUST00000194001 393 ntBASIC13.52□□□□□ -0.25
Hcn1O88704 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.52□□□□□ -0.25
Hcn1O88704 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hcn1O88704 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hcn1O88704 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.52□□□□□ -0.25
Hcn1O88704 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcn1O88704 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcn1O88704 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcn1O88704 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcn1O88704 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcn1O88704 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.52□□□□□ -0.25
Hcn1O88704 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcn1O88704 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hcn1O88704 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcn1O88704 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.52□□□□□ -0.25
Hcn1O88704 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcn1O88704 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcn1O88704 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hcn1O88704 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hcn1O88704 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.51□□□□□ -0.25
Hcn1O88704 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hcn1O88704 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.51□□□□□ -0.25
Hcn1O88704 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Gm8749-201ENSMUST00000117737 331 ntBASIC13.51□□□□□ -0.25
Hcn1O88704 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.51□□□□□ -0.25
Hcn1O88704 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.51□□□□□ -0.25
Hcn1O88704 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.51□□□□□ -0.25
Hcn1O88704 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.51□□□□□ -0.25
Hcn1O88704 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Gm2451-201ENSMUST00000199447 999 ntBASIC13.51□□□□□ -0.25
Hcn1O88704 Gm10290-201ENSMUST00000200451 999 ntBASIC13.51□□□□□ -0.25
Hcn1O88704 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.51□□□□□ -0.25
Hcn1O88704 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.51□□□□□ -0.25
Hcn1O88704 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.51□□□□□ -0.25
Hcn1O88704 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.51□□□□□ -0.25
Hcn1O88704 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hcn1O88704 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hcn1O88704 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.5□□□□□ -0.25
Hcn1O88704 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hcn1O88704 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.5□□□□□ -0.25
Hcn1O88704 Gm5479-201ENSMUST00000160578 435 ntBASIC13.5□□□□□ -0.25
Hcn1O88704 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.5□□□□□ -0.25
Hcn1O88704 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.5□□□□□ -0.25
Hcn1O88704 Gm24158-201ENSMUST00000175263 71 ntBASIC13.5□□□□□ -0.25
Hcn1O88704 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.5□□□□□ -0.25
Hcn1O88704 Gm10253-201ENSMUST00000194270 940 ntBASIC13.5□□□□□ -0.25
Hcn1O88704 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.5□□□□□ -0.25
Hcn1O88704 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Hcn1O88704 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hcn1O88704 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hcn1O88704 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.49□□□□□ -0.25
Hcn1O88704 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hcn1O88704 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hcn1O88704 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
Hcn1O88704 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hcn1O88704 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hcn1O88704 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hcn1O88704 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hcn1O88704 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hcn1O88704 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 246.6 ms