Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Dnmt3aO88508 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3aO88508 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3aO88508 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3aO88508 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3aO88508 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3aO88508 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Dnmt3aO88508 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3aO88508 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3aO88508 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3aO88508 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3aO88508 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Dnmt3aO88508 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.18□□□□□ -0.14
Dnmt3aO88508 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.18□□□□□ -0.14
Dnmt3aO88508 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Dnmt3aO88508 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Gm38294-201ENSMUST00000192831 381 ntBASIC14.17□□□□□ -0.14
Dnmt3aO88508 AA619741-201ENSMUST00000195095 646 ntBASIC14.17□□□□□ -0.14
Dnmt3aO88508 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3aO88508 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dnmt3aO88508 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Gm27533-201ENSMUST00000183800 152 ntBASIC14.16□□□□□ -0.14
Dnmt3aO88508 Gm17837-201ENSMUST00000186435 985 ntBASIC14.16□□□□□ -0.14
Dnmt3aO88508 Dupd1-202ENSMUST00000224735 548 ntBASIC14.16□□□□□ -0.14
Dnmt3aO88508 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.16□□□□□ -0.14
Dnmt3aO88508 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.16□□□□□ -0.14
Dnmt3aO88508 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.16□□□□□ -0.14
Dnmt3aO88508 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.16□□□□□ -0.14
Dnmt3aO88508 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dnmt3aO88508 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Dnmt3aO88508 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms