Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col5a1O88207 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col5a1O88207 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col5a1O88207 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col5a1O88207 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col5a1O88207 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col5a1O88207 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col5a1O88207 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Col5a1O88207 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col5a1O88207 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Col5a1O88207 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col5a1O88207 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.51□□□□□ -0.41
Col5a1O88207 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col5a1O88207 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col5a1O88207 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col5a1O88207 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.51□□□□□ -0.41
Col5a1O88207 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.51□□□□□ -0.41
Col5a1O88207 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.51□□□□□ -0.41
Col5a1O88207 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col5a1O88207 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.51□□□□□ -0.41
Col5a1O88207 Gm43138-201ENSMUST00000199123 708 ntBASIC12.51□□□□□ -0.41
Col5a1O88207 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col5a1O88207 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.51□□□□□ -0.41
Col5a1O88207 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col5a1O88207 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col5a1O88207 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col5a1O88207 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col5a1O88207 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Col5a1O88207 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.5□□□□□ -0.41
Col5a1O88207 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.5□□□□□ -0.41
Col5a1O88207 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Col5a1O88207 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Col5a1O88207 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.5□□□□□ -0.41
Col5a1O88207 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.5□□□□□ -0.41
Col5a1O88207 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.5□□□□□ -0.41
Col5a1O88207 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.5□□□□□ -0.41
Col5a1O88207 Gm38671-201ENSMUST00000200573 130 ntBASIC12.5□□□□□ -0.41
Col5a1O88207 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.5□□□□□ -0.41
Col5a1O88207 Gm5363-201ENSMUST00000211927 938 ntBASIC12.5□□□□□ -0.41
Col5a1O88207 Gm29787-201ENSMUST00000222129 849 ntBASIC12.5□□□□□ -0.41
Col5a1O88207 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.5□□□□□ -0.41
Col5a1O88207 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col5a1O88207 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col5a1O88207 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.49□□□□□ -0.41
Col5a1O88207 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Col5a1O88207 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Gm22323-201ENSMUST00000103832 109 ntBASIC12.49□□□□□ -0.41
Col5a1O88207 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.49□□□□□ -0.41
Col5a1O88207 Gm15371-201ENSMUST00000117057 784 ntBASIC12.49□□□□□ -0.41
Col5a1O88207 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.49□□□□□ -0.41
Col5a1O88207 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.49□□□□□ -0.41
Col5a1O88207 Gm45865-201ENSMUST00000211815 945 ntBASIC12.49□□□□□ -0.41
Col5a1O88207 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.49□□□□□ -0.41
Col5a1O88207 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.49□□□□□ -0.41
Col5a1O88207 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col5a1O88207 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.49□□□□□ -0.41
Col5a1O88207 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.49□□□□□ -0.41
Col5a1O88207 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.49□□□□□ -0.41
Col5a1O88207 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col5a1O88207 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC12.49□□□□□ -0.41
Col5a1O88207 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col5a1O88207 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col5a1O88207 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms