Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.32□□□□□ -0.12
Banf1O54962 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Banf1O54962 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Banf1O54962 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.31□□□□□ -0.12
Banf1O54962 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Banf1O54962 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.31□□□□□ -0.12
Banf1O54962 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Banf1O54962 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Banf1O54962 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Banf1O54962 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Banf1O54962 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Banf1O54962 Mir8117-201ENSMUST00000184773 107 ntBASIC14.3□□□□□ -0.12
Banf1O54962 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.3□□□□□ -0.12
Banf1O54962 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.3□□□□□ -0.12
Banf1O54962 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Banf1O54962 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.3□□□□□ -0.12
Banf1O54962 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Banf1O54962 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Banf1O54962 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.3□□□□□ -0.12
Banf1O54962 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Banf1O54962 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Banf1O54962 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Banf1O54962 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.29□□□□□ -0.12
Banf1O54962 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Banf1O54962 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Banf1O54962 Gm11779-201ENSMUST00000118541 368 ntBASIC14.29□□□□□ -0.12
Banf1O54962 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Banf1O54962 Gm12882-201ENSMUST00000121696 517 ntBASIC14.29□□□□□ -0.12
Banf1O54962 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Banf1O54962 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.29□□□□□ -0.12
Banf1O54962 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.29□□□□□ -0.12
Banf1O54962 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Banf1O54962 Gm17271-201ENSMUST00000165535 355 ntBASIC14.29□□□□□ -0.12
Banf1O54962 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.29□□□□□ -0.12
Banf1O54962 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.29□□□□□ -0.12
Banf1O54962 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.29□□□□□ -0.12
Banf1O54962 Gm10175-201ENSMUST00000086013 645 ntBASIC14.29□□□□□ -0.12
Banf1O54962 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Banf1O54962 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Banf1O54962 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Banf1O54962 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Banf1O54962 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Banf1O54962 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Banf1O54962 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Banf1O54962 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Banf1O54962 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Banf1O54962 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Banf1O54962 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Banf1O54962 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Banf1O54962 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Banf1O54962 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Banf1O54962 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Banf1O54962 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Banf1O54962 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Banf1O54962 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.28□□□□□ -0.12
Banf1O54962 Gm14494-201ENSMUST00000118786 435 ntBASIC14.28□□□□□ -0.12
Banf1O54962 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.28□□□□□ -0.12
Banf1O54962 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.28□□□□□ -0.12
Banf1O54962 Gm11745-201ENSMUST00000121669 448 ntBASIC14.28□□□□□ -0.12
Banf1O54962 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.28□□□□□ -0.12
Banf1O54962 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Banf1O54962 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms