Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.13■□□□□ 0.01
Nr1i3O35627 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.13■□□□□ 0.01
Nr1i3O35627 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.13■□□□□ 0.01
Nr1i3O35627 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1i3O35627 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1i3O35627 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nr1i3O35627 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nr1i3O35627 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nr1i3O35627 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.13■□□□□ 0.01
Nr1i3O35627 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nr1i3O35627 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1i3O35627 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.13■□□□□ 0.01
Nr1i3O35627 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Nr1i3O35627 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nr1i3O35627 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nr1i3O35627 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nr1i3O35627 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.12■□□□□ 0.01
Nr1i3O35627 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Nr1i3O35627 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.12■□□□□ 0.01
Nr1i3O35627 Gm9824-201ENSMUST00000178707 561 ntBASIC15.12■□□□□ 0.01
Nr1i3O35627 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 Gm44719-201ENSMUST00000206404 149 ntBASIC15.12■□□□□ 0.01
Nr1i3O35627 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.12■□□□□ 0.01
Nr1i3O35627 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nr1i3O35627 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.12■□□□□ 0.01
Nr1i3O35627 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nr1i3O35627 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nr1i3O35627 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Gm5566-201ENSMUST00000116118 459 ntBASIC15.11■□□□□ 0.01
Nr1i3O35627 Gm13365-201ENSMUST00000121188 973 ntBASIC15.11■□□□□ 0.01
Nr1i3O35627 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.11■□□□□ 0.01
Nr1i3O35627 Gm27525-201ENSMUST00000184465 107 ntBASIC15.11■□□□□ 0.01
Nr1i3O35627 Gm8000-201ENSMUST00000188378 592 ntBASIC15.11■□□□□ 0.01
Nr1i3O35627 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.11■□□□□ 0.01
Nr1i3O35627 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Nr1i3O35627 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.11■□□□□ 0.01
Nr1i3O35627 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Mir125a-201ENSMUST00000083545 68 ntBASIC15.11■□□□□ 0.01
Nr1i3O35627 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.11■□□□□ 0.01
Nr1i3O35627 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Nr1i3O35627 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nr1i3O35627 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1i3O35627 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1i3O35627 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Nr1i3O35627 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nr1i3O35627 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1i3O35627 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1i3O35627 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1i3O35627 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Nr1i3O35627 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nr1i3O35627 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1i3O35627 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.1■□□□□ 0.01
Nr1i3O35627 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1i3O35627 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1i3O35627 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Nr1i3O35627 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1i3O35627 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.1■□□□□ 0.01
Nr1i3O35627 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1i3O35627 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1i3O35627 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1i3O35627 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.1■□□□□ 0.01
Nr1i3O35627 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.1■□□□□ 0.01
Nr1i3O35627 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.1■□□□□ 0.01
Nr1i3O35627 Gm18027-201ENSMUST00000218947 619 ntBASIC15.1■□□□□ 0.01
Nr1i3O35627 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1i3O35627 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nr1i3O35627 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms