Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf11aO35305 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Gm4875-201ENSMUST00000118257 786 ntBASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Mir497b-201ENSMUST00000093601 125 ntBASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11aO35305 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Gm15487-201ENSMUST00000122373 465 ntBASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Auts2-212ENSMUST00000178555 309 ntBASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11aO35305 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11aO35305 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.11■□□□□ 0.01
Tnfrsf11aO35305 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms