Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Gm13036-201ENSMUST00000117799 748 ntBASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Gm7862-201ENSMUST00000121461 292 ntBASIC12.85□□□□□ -0.35
Shisa8J3QNX5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Gm45098-201ENSMUST00000207179 657 ntBASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 AV026068-213ENSMUST00000223675 1171 ntBASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shisa8J3QNX5 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Gm11452-201ENSMUST00000122376 690 ntBASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Gm21362-201ENSMUST00000194272 928 ntBASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Shisa8J3QNX5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Shisa8J3QNX5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Shisa8J3QNX5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Shisa8J3QNX5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Shisa8J3QNX5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.83□□□□□ -0.35
Shisa8J3QNX5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shisa8J3QNX5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms