Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.95□□□□□ -0.5
Gm3727J3QM54 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Gm3727J3QM54 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Gm6433-201ENSMUST00000118634 875 ntBASIC11.95□□□□□ -0.5
Gm3727J3QM54 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.95□□□□□ -0.5
Gm3727J3QM54 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Mir6982-201ENSMUST00000184354 68 ntBASIC11.95□□□□□ -0.5
Gm3727J3QM54 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3727J3QM54 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.94□□□□□ -0.5
Gm3727J3QM54 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Gm9682-201ENSMUST00000197505 556 ntBASIC11.94□□□□□ -0.5
Gm3727J3QM54 Gm9182-201ENSMUST00000217829 639 ntBASIC11.94□□□□□ -0.5
Gm3727J3QM54 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.94□□□□□ -0.5
Gm3727J3QM54 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3727J3QM54 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Gm25016-201ENSMUST00000158399 131 ntBASIC11.93□□□□□ -0.5
Gm3727J3QM54 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms