Protein–RNA interactions for Protein: E9Q414

Apob, Apolipoprotein B-100, mousemouse

Predictions only

Length 4,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApobE9Q414 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Gm12537-201ENSMUST00000119266 1002 ntBASIC8.38□□□□□ -1.07
ApobE9Q414 Gm12070-201ENSMUST00000119551 1002 ntBASIC8.38□□□□□ -1.07
ApobE9Q414 Gm12671-201ENSMUST00000119978 1002 ntBASIC8.38□□□□□ -1.07
ApobE9Q414 Gm13292-201ENSMUST00000120014 1000 ntBASIC8.38□□□□□ -1.07
ApobE9Q414 Gm12403-201ENSMUST00000121384 959 ntBASIC8.38□□□□□ -1.07
ApobE9Q414 Gm13316-201ENSMUST00000140537 691 ntBASIC8.38□□□□□ -1.07
ApobE9Q414 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC8.38□□□□□ -1.07
ApobE9Q414 Gm10359-201ENSMUST00000180167 1002 ntBASIC8.38□□□□□ -1.07
ApobE9Q414 Gm12033-201ENSMUST00000180654 1002 ntBASIC8.38□□□□□ -1.07
ApobE9Q414 Gm5559-201ENSMUST00000180755 1002 ntBASIC8.38□□□□□ -1.07
ApobE9Q414 Gm4335-201ENSMUST00000182581 1004 ntBASIC8.38□□□□□ -1.07
ApobE9Q414 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Gm8176-201ENSMUST00000191297 1099 ntBASIC8.38□□□□□ -1.07
ApobE9Q414 AC122371.3-201ENSMUST00000223402 1061 ntBASIC8.38□□□□□ -1.07
ApobE9Q414 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC8.38□□□□□ -1.07
ApobE9Q414 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC8.38□□□□□ -1.07
ApobE9Q414 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Gm45760-201ENSMUST00000212190 1782 ntBASIC8.38□□□□□ -1.07
ApobE9Q414 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC8.38□□□□□ -1.07
ApobE9Q414 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC8.38□□□□□ -1.07
ApobE9Q414 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
ApobE9Q414 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC8.38□□□□□ -1.07
ApobE9Q414 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
ApobE9Q414 Nsd1-205ENSMUST00000224693 852 ntBASIC8.38□□□□□ -1.07
ApobE9Q414 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 AC113441.2-201ENSMUST00000221538 1468 ntBASIC8.38□□□□□ -1.07
ApobE9Q414 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ApobE9Q414 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
ApobE9Q414 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
ApobE9Q414 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
ApobE9Q414 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC8.37□□□□□ -1.07
ApobE9Q414 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC8.37□□□□□ -1.07
ApobE9Q414 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
ApobE9Q414 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Gm14263-201ENSMUST00000117955 746 ntBASIC8.37□□□□□ -1.07
ApobE9Q414 Gm18753-201ENSMUST00000201000 566 ntBASIC8.37□□□□□ -1.07
ApobE9Q414 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC8.37□□□□□ -1.07
ApobE9Q414 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
ApobE9Q414 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC8.37□□□□□ -1.07
ApobE9Q414 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
ApobE9Q414 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Gm45212-201ENSMUST00000205831 3403 ntBASIC8.37□□□□□ -1.07
ApobE9Q414 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC8.37□□□□□ -1.07
ApobE9Q414 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC8.37□□□□□ -1.07
ApobE9Q414 Gm43068-201ENSMUST00000201095 1273 ntBASIC8.37□□□□□ -1.07
ApobE9Q414 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
ApobE9Q414 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
ApobE9Q414 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC8.37□□□□□ -1.07
ApobE9Q414 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
ApobE9Q414 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
ApobE9Q414 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC8.37□□□□□ -1.07
ApobE9Q414 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC8.37□□□□□ -1.07
ApobE9Q414 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC8.37□□□□□ -1.07
ApobE9Q414 Gm42627-201ENSMUST00000197347 224 ntBASIC8.37□□□□□ -1.07
ApobE9Q414 Gm44069-201ENSMUST00000204898 506 ntBASIC8.37□□□□□ -1.07
ApobE9Q414 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ApobE9Q414 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
ApobE9Q414 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
ApobE9Q414 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
ApobE9Q414 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
ApobE9Q414 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
ApobE9Q414 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
ApobE9Q414 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms