Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Gm15460-201ENSMUST00000118147 391 ntBASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Gm27306-201ENSMUST00000183970 107 ntBASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Gm7775-201ENSMUST00000218871 853 ntBASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cpsf4lE9Q2N0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cpsf4lE9Q2N0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Cpsf4lE9Q2N0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms