Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm2451-201ENSMUST00000199447 999 ntBASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm10290-201ENSMUST00000200451 999 ntBASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm45328-201ENSMUST00000210942 917 ntBASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccnb1ip1D3Z3K2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm9013-201ENSMUST00000132939 882 ntBASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Mir3081-201ENSMUST00000175305 84 ntBASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccnb1ip1D3Z3K2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccnb1ip1D3Z3K2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms