Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Gm6659-201ENSMUST00000174752 547 ntBASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Gm27357-201ENSMUST00000183754 135 ntBASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Gm6089-201ENSMUST00000197666 938 ntBASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm12887B1AVM1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm12887B1AVM1 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm12887B1AVM1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm12887B1AVM1 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm12887B1AVM1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm12887B1AVM1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.39□□□□□ -0.59
Gm12887B1AVM1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Gm25925-201ENSMUST00000158314 306 ntBASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm12887B1AVM1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Gm37230-201ENSMUST00000194491 818 ntBASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Gm10252-201ENSMUST00000209541 832 ntBASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm12887B1AVM1 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms