Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.87□□□□□ -0.51
Col6a4A2AX52 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.87□□□□□ -0.51
Col6a4A2AX52 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Gm6983-201ENSMUST00000214912 628 ntBASIC11.87□□□□□ -0.51
Col6a4A2AX52 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.87□□□□□ -0.51
Col6a4A2AX52 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC11.86□□□□□ -0.51
Col6a4A2AX52 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Col6a4A2AX52 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.86□□□□□ -0.51
Col6a4A2AX52 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.86□□□□□ -0.51
Col6a4A2AX52 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Gm12928-201ENSMUST00000117115 573 ntBASIC11.86□□□□□ -0.51
Col6a4A2AX52 Gm12176-201ENSMUST00000121420 875 ntBASIC11.86□□□□□ -0.51
Col6a4A2AX52 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.86□□□□□ -0.51
Col6a4A2AX52 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a4A2AX52 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.85□□□□□ -0.51
Col6a4A2AX52 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.85□□□□□ -0.51
Col6a4A2AX52 Mir3547-201ENSMUST00000175461 88 ntBASIC11.85□□□□□ -0.51
Col6a4A2AX52 Gm29649-201ENSMUST00000185649 419 ntBASIC11.85□□□□□ -0.51
Col6a4A2AX52 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Gm24526-201ENSMUST00000082921 158 ntBASIC11.85□□□□□ -0.51
Col6a4A2AX52 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Gm6091-201ENSMUST00000098307 165 ntBASIC11.85□□□□□ -0.51
Col6a4A2AX52 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a4A2AX52 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms