Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Gm9385-201ENSMUST00000117563 472 ntBASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Gm18195-201ENSMUST00000207604 706 ntBASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Gm7461-201ENSMUST00000058918 827 ntBASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav12d-1A0N8R0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Gm13884-201ENSMUST00000118103 829 ntBASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Mir5131-201ENSMUST00000175426 93 ntBASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Gm5864-201ENSMUST00000202263 970 ntBASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12d-1A0N8R0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms