Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv29A0A0G2LB96 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trbv29A0A0G2LB96 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv29A0A0G2LB96 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Gm17968-201ENSMUST00000194902 784 ntBASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv29A0A0G2LB96 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Gm14140-201ENSMUST00000119999 995 ntBASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Gm11543-201ENSMUST00000120758 370 ntBASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Gm2651-201ENSMUST00000203560 838 ntBASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Gm44608-201ENSMUST00000206827 855 ntBASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trbv29A0A0G2LB96 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Rpph1-201ENSMUST00000175096 319 ntBASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv29A0A0G2LB96 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.66□□□□□ -0.54
Trbv29A0A0G2LB96 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv29A0A0G2LB96 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trbv29A0A0G2LB96 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms