Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Gm43677-201ENSMUST00000198098 2378 ntBASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Gm12020-201ENSMUST00000119030 2042 ntBASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC8.8□□□□□ -1
Igkv8-27A0A0G2JF28 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Gm12497-201ENSMUST00000138778 237 ntBASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Gm6623-201ENSMUST00000173570 544 ntBASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Gm18959-201ENSMUST00000208954 655 ntBASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
Igkv8-27A0A0G2JF28 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 Gm44454-201ENSMUST00000198541 138 ntBASIC8.78□□□□□ -1
Igkv8-27A0A0G2JF28 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms