Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm6296-201ENSMUST00000222599 943 ntBASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm4535-201ENSMUST00000182274 558 ntBASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 AC154471.1-201ENSMUST00000224418 436 ntBASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm10355-201ENSMUST00000097146 517 ntBASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm27646-201ENSMUST00000183989 110 ntBASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gm37584-201ENSMUST00000193595 1290 ntBASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3n-3A0A0G2JEM0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms