Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav8-1A0A075B641 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Gm8344-201ENSMUST00000119813 856 ntBASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Gm25016-201ENSMUST00000158399 131 ntBASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Gm10499-201ENSMUST00000174094 934 ntBASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Gm6345-202ENSMUST00000180900 204 ntBASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Mir6982-201ENSMUST00000184354 68 ntBASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Gm18041-201ENSMUST00000218210 618 ntBASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav8-1A0A075B641 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms