Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Gm14767-201ENSMUST00000121559 586 ntBASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Gm7775-201ENSMUST00000218871 853 ntBASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Gm2423-201ENSMUST00000074863 733 ntBASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Phf1Q9Z1B8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Gm38391-201ENSMUST00000191720 4069 ntBASIC13□□□□□ -0.33
Phf1Q9Z1B8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Gm24543-201ENSMUST00000103867 82 ntBASIC13□□□□□ -0.33
Phf1Q9Z1B8 Gm11424-201ENSMUST00000121929 829 ntBASIC13□□□□□ -0.33
Phf1Q9Z1B8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Phf1Q9Z1B8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Phf1Q9Z1B8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Mir7684-201ENSMUST00000183858 60 ntBASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Gm44344-201ENSMUST00000200287 129 ntBASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Shd-206ENSMUST00000225145 998 ntBASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Phf1Q9Z1B8 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.98□□□□□ -0.33
Phf1Q9Z1B8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms