Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rtn3Q9ES97 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rtn3Q9ES97 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rtn3Q9ES97 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rtn3Q9ES97 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Rtn3Q9ES97 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rtn3Q9ES97 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Rtn3Q9ES97 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Rtn3Q9ES97 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.04■□□□□ -0
Rtn3Q9ES97 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.04■□□□□ -0
Rtn3Q9ES97 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Gm14057-201ENSMUST00000120631 482 ntBASIC15.04■□□□□ -0
Rtn3Q9ES97 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.04■□□□□ -0
Rtn3Q9ES97 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rtn3Q9ES97 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rtn3Q9ES97 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rtn3Q9ES97 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.03■□□□□ -0
Rtn3Q9ES97 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.03■□□□□ -0
Rtn3Q9ES97 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rtn3Q9ES97 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rtn3Q9ES97 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Mir7023-201ENSMUST00000185093 64 ntBASIC15.03■□□□□ -0
Rtn3Q9ES97 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.03■□□□□ -0
Rtn3Q9ES97 Gm18049-201ENSMUST00000208909 581 ntBASIC15.03■□□□□ -0
Rtn3Q9ES97 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.03■□□□□ -0
Rtn3Q9ES97 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.03■□□□□ -0
Rtn3Q9ES97 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rtn3Q9ES97 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rtn3Q9ES97 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rtn3Q9ES97 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.02■□□□□ -0
Rtn3Q9ES97 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rtn3Q9ES97 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rtn3Q9ES97 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rtn3Q9ES97 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rtn3Q9ES97 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rtn3Q9ES97 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rtn3Q9ES97 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.02■□□□□ -0
Rtn3Q9ES97 Gm15693-201ENSMUST00000120470 637 ntBASIC15.02■□□□□ -0
Rtn3Q9ES97 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Rtn3Q9ES97 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.02■□□□□ -0
Rtn3Q9ES97 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.02■□□□□ -0
Rtn3Q9ES97 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.02■□□□□ -0
Rtn3Q9ES97 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rtn3Q9ES97 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.02■□□□□ -0
Rtn3Q9ES97 Gm5779-201ENSMUST00000218467 910 ntBASIC15.02■□□□□ -0
Rtn3Q9ES97 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rtn3Q9ES97 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rtn3Q9ES97 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Rtn3Q9ES97 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rtn3Q9ES97 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rtn3Q9ES97 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rtn3Q9ES97 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rtn3Q9ES97 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rtn3Q9ES97 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rtn3Q9ES97 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rtn3Q9ES97 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rtn3Q9ES97 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.02□□□□□ -0.01
Rtn3Q9ES97 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rtn3Q9ES97 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rtn3Q9ES97 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms