Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Gm16026-204ENSMUST00000162652 683 ntBASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Gm2451-201ENSMUST00000199447 999 ntBASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Gm10290-201ENSMUST00000200451 999 ntBASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Olfr286-202ENSMUST00000205305 969 ntBASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Gm10154-201ENSMUST00000084445 354 ntBASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Gm45747-201ENSMUST00000212203 999 ntBASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lima1Q9ERG0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Gm27301-201ENSMUST00000184012 127 ntBASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Gm44771-201ENSMUST00000206975 626 ntBASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Gm18206-201ENSMUST00000207027 926 ntBASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lima1Q9ERG0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms