Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cpne8Q9DC53 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Cpne8Q9DC53 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.71□□□□□ -0.06
Cpne8Q9DC53 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cpne8Q9DC53 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Cpne8Q9DC53 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cpne8Q9DC53 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Chchd1-203ENSMUST00000224633 557 ntBASIC14.7□□□□□ -0.06
Cpne8Q9DC53 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpne8Q9DC53 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Gm12428-201ENSMUST00000119844 727 ntBASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Gm18049-201ENSMUST00000208909 581 ntBASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Gm45453-201ENSMUST00000211758 853 ntBASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne8Q9DC53 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Gm5779-201ENSMUST00000218467 910 ntBASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Mir125a-201ENSMUST00000083545 68 ntBASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Cpne8Q9DC53 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms