Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3a3Q9D554 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3a3Q9D554 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3a3Q9D554 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3a3Q9D554 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3a3Q9D554 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sf3a3Q9D554 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3a3Q9D554 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3a3Q9D554 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3a3Q9D554 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.27□□□□□ -0.12
Sf3a3Q9D554 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3a3Q9D554 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3a3Q9D554 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3a3Q9D554 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3a3Q9D554 Gm8584-201ENSMUST00000171982 758 ntBASIC14.27□□□□□ -0.13
Sf3a3Q9D554 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3a3Q9D554 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.27□□□□□ -0.13
Sf3a3Q9D554 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.27□□□□□ -0.13
Sf3a3Q9D554 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3a3Q9D554 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Sf3a3Q9D554 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sf3a3Q9D554 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3a3Q9D554 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3a3Q9D554 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sf3a3Q9D554 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3a3Q9D554 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3a3Q9D554 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3a3Q9D554 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms