Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim13Q9CYB0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Gm13884-201ENSMUST00000118103 829 ntBASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Gm6376-201ENSMUST00000209407 580 ntBASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim13Q9CYB0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Gm15173-201ENSMUST00000122049 433 ntBASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim13Q9CYB0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim13Q9CYB0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim13Q9CYB0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim13Q9CYB0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim13Q9CYB0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trim13Q9CYB0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.02□□□□□ -0.32
Trim13Q9CYB0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim13Q9CYB0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim13Q9CYB0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Trim13Q9CYB0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim13Q9CYB0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim13Q9CYB0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim13Q9CYB0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim13Q9CYB0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.02□□□□□ -0.32
Trim13Q9CYB0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim13Q9CYB0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Gm11452-201ENSMUST00000122376 690 ntBASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim13Q9CYB0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms