Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Gm25925-201ENSMUST00000158314 306 ntBASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Gm4899-201ENSMUST00000178708 719 ntBASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx47Q9CWX9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx47Q9CWX9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx47Q9CWX9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx47Q9CWX9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx47Q9CWX9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx47Q9CWX9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx47Q9CWX9 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.52□□□□□ -0.08
Ddx47Q9CWX9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx47Q9CWX9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Ddx47Q9CWX9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ddx47Q9CWX9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.52□□□□□ -0.09
Ddx47Q9CWX9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.52□□□□□ -0.09
Ddx47Q9CWX9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ddx47Q9CWX9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx47Q9CWX9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.52□□□□□ -0.09
Ddx47Q9CWX9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx47Q9CWX9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ddx47Q9CWX9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.52□□□□□ -0.09
Ddx47Q9CWX9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx47Q9CWX9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ddx47Q9CWX9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx47Q9CWX9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx47Q9CWX9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx47Q9CWX9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx47Q9CWX9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Gm25990-201ENSMUST00000102440 86 ntBASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Gm11764-201ENSMUST00000120221 623 ntBASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx47Q9CWX9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx47Q9CWX9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx47Q9CWX9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx47Q9CWX9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.5□□□□□ -0.09
Ddx47Q9CWX9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx47Q9CWX9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms