Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rpl39lQ9CQD0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Gm9013-201ENSMUST00000132939 882 ntBASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Gm45328-201ENSMUST00000210942 917 ntBASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Gm8655-201ENSMUST00000221159 852 ntBASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rpl39lQ9CQD0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Gm37133-201ENSMUST00000192705 1922 ntBASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Gm5837-201ENSMUST00000191844 1369 ntBASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Gm9484-201ENSMUST00000195892 1159 ntBASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Gm7506-201ENSMUST00000207758 815 ntBASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 AC154595.3-201ENSMUST00000224579 384 ntBASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Gm37795-201ENSMUST00000194216 2459 ntBASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Rpl39lQ9CQD0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms