Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Gm45098-201ENSMUST00000207179 657 ntBASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Gm18041-201ENSMUST00000218210 618 ntBASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.73□□□□□ -0.37
Krt88Q9CPR6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Gm7230-201ENSMUST00000173026 815 ntBASIC12.72□□□□□ -0.37
Krt88Q9CPR6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Gm6550-201ENSMUST00000187574 993 ntBASIC12.72□□□□□ -0.37
Krt88Q9CPR6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Gm45747-201ENSMUST00000212203 999 ntBASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Krt88Q9CPR6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Krt88Q9CPR6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms