Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trim8Q99PJ2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim8Q99PJ2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Gm5479-201ENSMUST00000160578 435 ntBASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Gm9182-201ENSMUST00000217829 639 ntBASIC13.82□□□□□ -0.2
Trim8Q99PJ2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim8Q99PJ2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim8Q99PJ2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms