Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.77□□□□□ -0.21
Msh4Q99MT2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msh4Q99MT2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Msh4Q99MT2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Gm6415-201ENSMUST00000118488 348 ntBASIC13.76□□□□□ -0.21
Msh4Q99MT2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.76□□□□□ -0.21
Msh4Q99MT2 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.76□□□□□ -0.21
Msh4Q99MT2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msh4Q99MT2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.75□□□□□ -0.21
Msh4Q99MT2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.75□□□□□ -0.21
Msh4Q99MT2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Gm15693-201ENSMUST00000120470 637 ntBASIC13.75□□□□□ -0.21
Msh4Q99MT2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Gm29541-201ENSMUST00000191351 678 ntBASIC13.75□□□□□ -0.21
Msh4Q99MT2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msh4Q99MT2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msh4Q99MT2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms