Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col25a1Q99MQ5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col25a1Q99MQ5 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Gm24255-201ENSMUST00000104481 128 ntBASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Gm14381-201ENSMUST00000122105 414 ntBASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Olfr284-202ENSMUST00000206647 966 ntBASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col25a1Q99MQ5 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Gm25668-201ENSMUST00000157700 129 ntBASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Mir125a-201ENSMUST00000083545 68 ntBASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col25a1Q99MQ5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms