Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.23□□□□□ -0.13
Cdk9Q99J95 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk9Q99J95 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Gm7222-201ENSMUST00000117512 906 ntBASIC14.22□□□□□ -0.13
Cdk9Q99J95 Gm14042-201ENSMUST00000120139 833 ntBASIC14.22□□□□□ -0.13
Cdk9Q99J95 Gm15173-201ENSMUST00000122049 433 ntBASIC14.22□□□□□ -0.13
Cdk9Q99J95 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Gm7230-201ENSMUST00000173026 815 ntBASIC14.22□□□□□ -0.13
Cdk9Q99J95 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Mir5131-201ENSMUST00000175426 93 ntBASIC14.22□□□□□ -0.13
Cdk9Q99J95 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk9Q99J95 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.21□□□□□ -0.13
Cdk9Q99J95 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cdk9Q99J95 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cdk9Q99J95 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.21□□□□□ -0.13
Cdk9Q99J95 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdk9Q99J95 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Cdk9Q99J95 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.21□□□□□ -0.14
Cdk9Q99J95 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdk9Q99J95 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdk9Q99J95 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdk9Q99J95 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cdk9Q99J95 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
Cdk9Q99J95 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.14
Cdk9Q99J95 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.21□□□□□ -0.14
Cdk9Q99J95 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cdk9Q99J95 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdk9Q99J95 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.2□□□□□ -0.14
Cdk9Q99J95 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdk9Q99J95 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms