Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm15806-201ENSMUST00000120696 955 ntBASIC16.29■□□□□ 0.2
Smc1bQ920F6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.29■□□□□ 0.2
Smc1bQ920F6 AY702102-202ENSMUST00000194651 1173 ntBASIC16.29■□□□□ 0.2
Smc1bQ920F6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.28■□□□□ 0.2
Smc1bQ920F6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.28■□□□□ 0.2
Smc1bQ920F6 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.28■□□□□ 0.2
Smc1bQ920F6 Gm18624-201ENSMUST00000220966 658 ntBASIC16.28■□□□□ 0.2
Smc1bQ920F6 Dupd1-202ENSMUST00000224735 548 ntBASIC16.28■□□□□ 0.2
Smc1bQ920F6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc1bQ920F6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.27■□□□□ 0.2
Smc1bQ920F6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.27■□□□□ 0.2
Smc1bQ920F6 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.27■□□□□ 0.2
Smc1bQ920F6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smc1bQ920F6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc1bQ920F6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smc1bQ920F6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.27■□□□□ 0.19
Smc1bQ920F6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Smc1bQ920F6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Smc1bQ920F6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smc1bQ920F6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smc1bQ920F6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Smc1bQ920F6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Smc1bQ920F6 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smc1bQ920F6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smc1bQ920F6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smc1bQ920F6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smc1bQ920F6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Gm5479-201ENSMUST00000160578 435 ntBASIC16.26■□□□□ 0.19
Smc1bQ920F6 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.26■□□□□ 0.19
Smc1bQ920F6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms