Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Gm28630-201ENSMUST00000187806 498 ntBASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Gm24543-201ENSMUST00000103867 82 ntBASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb1Q91Y08 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Gm12428-201ENSMUST00000119844 727 ntBASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.65□□□□□ -0.06
Pcdhb1Q91Y08 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb1Q91Y08 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms