Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Gm11025-201ENSMUST00000140773 466 ntBASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 AW822252-206ENSMUST00000208904 237 ntBASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb4Q91XZ6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Gm6443-201ENSMUST00000203599 874 ntBASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Gm10175-201ENSMUST00000086013 645 ntBASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb4Q91XZ6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb4Q91XZ6 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.02□□□□□ -0.16
Pcdhb4Q91XZ6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb4Q91XZ6 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb4Q91XZ6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Pcdhb4Q91XZ6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.02□□□□□ -0.16
Pcdhb4Q91XZ6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb4Q91XZ6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb4Q91XZ6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb4Q91XZ6 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.02□□□□□ -0.16
Pcdhb4Q91XZ6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb4Q91XZ6 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb4Q91XZ6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Gm10275-202ENSMUST00000168697 495 ntBASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Gm5264-201ENSMUST00000190584 848 ntBASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Gm10275-201ENSMUST00000092620 635 ntBASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb4Q91XZ6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb4Q91XZ6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms