Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.92□□□□□ -0.18
Vsx1Q91V10 Olfr286-202ENSMUST00000205305 969 ntBASIC13.92□□□□□ -0.18
Vsx1Q91V10 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.92□□□□□ -0.18
Vsx1Q91V10 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.92□□□□□ -0.18
Vsx1Q91V10 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vsx1Q91V10 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.91□□□□□ -0.18
Vsx1Q91V10 Gm7561-201ENSMUST00000211203 886 ntBASIC13.91□□□□□ -0.18
Vsx1Q91V10 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.91□□□□□ -0.18
Vsx1Q91V10 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.91□□□□□ -0.18
Vsx1Q91V10 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.91□□□□□ -0.18
Vsx1Q91V10 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vsx1Q91V10 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.9□□□□□ -0.18
Vsx1Q91V10 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.9□□□□□ -0.18
Vsx1Q91V10 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.9□□□□□ -0.18
Vsx1Q91V10 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.9□□□□□ -0.18
Vsx1Q91V10 Gm8652-201ENSMUST00000181363 964 ntBASIC13.9□□□□□ -0.18
Vsx1Q91V10 Gm27572-201ENSMUST00000183702 255 ntBASIC13.9□□□□□ -0.18
Vsx1Q91V10 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.9□□□□□ -0.18
Vsx1Q91V10 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.9□□□□□ -0.18
Vsx1Q91V10 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms