Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Gm11524-201ENSMUST00000119349 807 ntBASIC14.98□□□□□ -0.01
TraipQ8VIG6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.98□□□□□ -0.01
TraipQ8VIG6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TraipQ8VIG6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.98□□□□□ -0.01
TraipQ8VIG6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TraipQ8VIG6 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TraipQ8VIG6 AC123738.2-201ENSMUST00000223791 1899 ntBASIC14.97□□□□□ -0.01
TraipQ8VIG6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Mir698-201ENSMUST00000102164 109 ntBASIC14.97□□□□□ -0.01
TraipQ8VIG6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.97□□□□□ -0.01
TraipQ8VIG6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.97□□□□□ -0.01
TraipQ8VIG6 AC159376.1-201ENSMUST00000218504 630 ntBASIC14.97□□□□□ -0.01
TraipQ8VIG6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TraipQ8VIG6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.96□□□□□ -0.01
TraipQ8VIG6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Gm15678-201ENSMUST00000117573 960 ntBASIC14.96□□□□□ -0.01
TraipQ8VIG6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Gm43094-201ENSMUST00000196549 921 ntBASIC14.96□□□□□ -0.01
TraipQ8VIG6 Gm43433-201ENSMUST00000196573 481 ntBASIC14.96□□□□□ -0.01
TraipQ8VIG6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.96□□□□□ -0.01
TraipQ8VIG6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.96□□□□□ -0.01
TraipQ8VIG6 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.96□□□□□ -0.01
TraipQ8VIG6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TraipQ8VIG6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TraipQ8VIG6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
TraipQ8VIG6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TraipQ8VIG6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TraipQ8VIG6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TraipQ8VIG6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TraipQ8VIG6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TraipQ8VIG6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TraipQ8VIG6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms