Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Trim60Q8VI40 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trim60Q8VI40 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trim60Q8VI40 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim60Q8VI40 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Trim60Q8VI40 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim60Q8VI40 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim60Q8VI40 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim60Q8VI40 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Trim60Q8VI40 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.58□□□□□ -0.08
Trim60Q8VI40 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.58□□□□□ -0.08
Trim60Q8VI40 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trim60Q8VI40 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.57□□□□□ -0.08
Trim60Q8VI40 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.57□□□□□ -0.08
Trim60Q8VI40 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Gm1401-201ENSMUST00000122048 772 ntBASIC14.57□□□□□ -0.08
Trim60Q8VI40 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim60Q8VI40 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.57□□□□□ -0.08
Trim60Q8VI40 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim60Q8VI40 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Gm15957-201ENSMUST00000118893 974 ntBASIC14.56□□□□□ -0.08
Trim60Q8VI40 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Gm11025-201ENSMUST00000140773 466 ntBASIC14.56□□□□□ -0.08
Trim60Q8VI40 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Mir3113-201ENSMUST00000175478 76 ntBASIC14.56□□□□□ -0.08
Trim60Q8VI40 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.56□□□□□ -0.08
Trim60Q8VI40 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.56□□□□□ -0.08
Trim60Q8VI40 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim60Q8VI40 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms