Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc9Q8VC31 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc9Q8VC31 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.96■□□□□ 0.3
Ccdc9Q8VC31 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc9Q8VC31 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc9Q8VC31 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc9Q8VC31 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Gm38114-201ENSMUST00000191877 1232 ntBASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc9Q8VC31 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Ccdc9Q8VC31 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms