Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Gm18041-201ENSMUST00000218210 618 ntBASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc58Q8R3Q6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc58Q8R3Q6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Gm2451-201ENSMUST00000199447 999 ntBASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Gm10290-201ENSMUST00000200451 999 ntBASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms