Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nup58Q8R332 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Nup58Q8R332 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.13■□□□□ 0.01
Nup58Q8R332 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Nup58Q8R332 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nup58Q8R332 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nup58Q8R332 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nup58Q8R332 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nup58Q8R332 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nup58Q8R332 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nup58Q8R332 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nup58Q8R332 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nup58Q8R332 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nup58Q8R332 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nup58Q8R332 Gm15427-201ENSMUST00000117288 531 ntBASIC15.12■□□□□ 0.01
Nup58Q8R332 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.12■□□□□ 0.01
Nup58Q8R332 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Nup58Q8R332 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.12■□□□□ 0.01
Nup58Q8R332 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nup58Q8R332 Gm8396-201ENSMUST00000057361 823 ntBASIC15.12■□□□□ 0.01
Nup58Q8R332 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nup58Q8R332 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.12■□□□□ 0.01
Nup58Q8R332 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Nup58Q8R332 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nup58Q8R332 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nup58Q8R332 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nup58Q8R332 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nup58Q8R332 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nup58Q8R332 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nup58Q8R332 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nup58Q8R332 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.12■□□□□ 0.01
Nup58Q8R332 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nup58Q8R332 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.11■□□□□ 0.01
Nup58Q8R332 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nup58Q8R332 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nup58Q8R332 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.11■□□□□ 0.01
Nup58Q8R332 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.11■□□□□ 0.01
Nup58Q8R332 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.11■□□□□ 0.01
Nup58Q8R332 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nup58Q8R332 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Nup58Q8R332 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nup58Q8R332 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup58Q8R332 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup58Q8R332 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup58Q8R332 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.1■□□□□ 0.01
Nup58Q8R332 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nup58Q8R332 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nup58Q8R332 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup58Q8R332 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nup58Q8R332 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.1■□□□□ 0.01
Nup58Q8R332 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup58Q8R332 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup58Q8R332 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nup58Q8R332 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup58Q8R332 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup58Q8R332 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup58Q8R332 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.1■□□□□ 0.01
Nup58Q8R332 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Nup58Q8R332 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.1■□□□□ 0.01
Nup58Q8R332 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.1■□□□□ 0.01
Nup58Q8R332 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nup58Q8R332 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.1■□□□□ 0.01
Nup58Q8R332 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.1■□□□□ 0.01
Nup58Q8R332 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup58Q8R332 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nup58Q8R332 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms