Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 Gm43630-201ENSMUST00000201550 776 ntBASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp7Q8R1T1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Gm12928-201ENSMUST00000117115 573 ntBASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 AC166349.1-201ENSMUST00000220866 695 ntBASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Mir497b-201ENSMUST00000093601 125 ntBASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.97■□□□□ 0.47
Chmp7Q8R1T1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp7Q8R1T1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Gm12485-201ENSMUST00000119641 291 ntBASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Gm7287-201ENSMUST00000205267 602 ntBASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp7Q8R1T1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.94■□□□□ 0.46
Chmp7Q8R1T1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms