Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Gm15806-201ENSMUST00000120696 955 ntBASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Gm5035-201ENSMUST00000215581 927 ntBASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsph6aQ8CDR2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph6aQ8CDR2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph6aQ8CDR2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph6aQ8CDR2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Rsph6aQ8CDR2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph6aQ8CDR2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph6aQ8CDR2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph6aQ8CDR2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph6aQ8CDR2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph6aQ8CDR2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsph6aQ8CDR2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.33■□□□□ 0.53
Rsph6aQ8CDR2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Gm11524-201ENSMUST00000119349 807 ntBASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Gm26464-201ENSMUST00000157094 305 ntBASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Gm8602-201ENSMUST00000184045 607 ntBASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Gm38102-201ENSMUST00000192791 1935 ntBASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rsph6aQ8CDR2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Gm5912-201ENSMUST00000122282 1438 ntBASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Gm8584-201ENSMUST00000171982 758 ntBASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Gm2495-201ENSMUST00000191160 466 ntBASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rsph6aQ8CDR2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Gm29741-201ENSMUST00000192667 421 ntBASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rsph6aQ8CDR2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms