Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.6■□□□□ 0.25
E4f1Q8CCE9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
E4f1Q8CCE9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm29310-201ENSMUST00000185468 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm21825-201ENSMUST00000185728 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm29109-201ENSMUST00000185895 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm21896-201ENSMUST00000186520 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm21873-201ENSMUST00000186728 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm21794-201ENSMUST00000187056 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm21880-201ENSMUST00000187275 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm21826-201ENSMUST00000187451 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm21198-201ENSMUST00000188393 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm21749-201ENSMUST00000189343 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm21901-201ENSMUST00000189568 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm29424-201ENSMUST00000189716 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm28599-201ENSMUST00000189838 694 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm21867-201ENSMUST00000189917 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm29269-201ENSMUST00000190087 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm21722-201ENSMUST00000190153 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm28423-201ENSMUST00000190701 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm21899-201ENSMUST00000190745 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm21910-201ENSMUST00000191163 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm21849-201ENSMUST00000191571 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm28678-201ENSMUST00000191593 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm20910-201ENSMUST00000193268 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm21871-201ENSMUST00000194621 696 ntBASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.59■□□□□ 0.25
E4f1Q8CCE9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
E4f1Q8CCE9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
E4f1Q8CCE9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.25
E4f1Q8CCE9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
E4f1Q8CCE9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
E4f1Q8CCE9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
E4f1Q8CCE9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Gm4875-201ENSMUST00000118257 786 ntBASIC16.58■□□□□ 0.24
E4f1Q8CCE9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Gm43703-201ENSMUST00000200523 763 ntBASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Gm16476-201ENSMUST00000221544 139 ntBASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.58■□□□□ 0.24
E4f1Q8CCE9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
E4f1Q8CCE9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
E4f1Q8CCE9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
E4f1Q8CCE9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
E4f1Q8CCE9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
E4f1Q8CCE9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
E4f1Q8CCE9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.57■□□□□ 0.24
E4f1Q8CCE9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
E4f1Q8CCE9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
E4f1Q8CCE9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
E4f1Q8CCE9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms