Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp44Q8C2S0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp44Q8C2S0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Gm15487-201ENSMUST00000122373 465 ntBASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Mir7023-201ENSMUST00000185093 64 ntBASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp44Q8C2S0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Gm4804-201ENSMUST00000182234 999 ntBASIC16.46■□□□□ 0.23
Usp44Q8C2S0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.46■□□□□ 0.23
Usp44Q8C2S0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Usp44Q8C2S0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
Usp44Q8C2S0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp44Q8C2S0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms