Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps9d1Q8C190 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps9d1Q8C190 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps9d1Q8C190 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Gm16198-201ENSMUST00000118766 670 ntBASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Gm17271-201ENSMUST00000165535 355 ntBASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Gm8584-201ENSMUST00000171982 758 ntBASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps9d1Q8C190 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Gm37230-201ENSMUST00000194491 818 ntBASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Gm45098-201ENSMUST00000207179 657 ntBASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps9d1Q8C190 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Thap2-203ENSMUST00000218989 527 ntBASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.21□□□□□ -0.29
Vps9d1Q8C190 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps9d1Q8C190 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms