Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp47Q8BY87 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp47Q8BY87 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp47Q8BY87 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Usp47Q8BY87 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Usp47Q8BY87 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp47Q8BY87 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp47Q8BY87 Mir698-201ENSMUST00000102164 109 ntBASIC19.82■□□□□ 0.76
Usp47Q8BY87 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp47Q8BY87 Mir7654-201ENSMUST00000185082 70 ntBASIC19.82■□□□□ 0.76
Usp47Q8BY87 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp47Q8BY87 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp47Q8BY87 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Usp47Q8BY87 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp47Q8BY87 Gm10676-201ENSMUST00000098778 3221 ntBASIC19.81■□□□□ 0.76
Usp47Q8BY87 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC19.81■□□□□ 0.76
Usp47Q8BY87 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Gm45384-201ENSMUST00000210451 277 ntBASIC19.81■□□□□ 0.76
Usp47Q8BY87 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp47Q8BY87 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp47Q8BY87 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Gm11524-201ENSMUST00000119349 807 ntBASIC19.8■□□□□ 0.76
Usp47Q8BY87 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Mir6392-201ENSMUST00000184924 108 ntBASIC19.8■□□□□ 0.76
Usp47Q8BY87 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC19.8■□□□□ 0.76
Usp47Q8BY87 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Gm43094-201ENSMUST00000196549 921 ntBASIC19.8■□□□□ 0.76
Usp47Q8BY87 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC19.8■□□□□ 0.76
Usp47Q8BY87 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC19.79■□□□□ 0.76
Usp47Q8BY87 AC155258.1-201ENSMUST00000219303 253 ntBASIC19.79■□□□□ 0.76
Usp47Q8BY87 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp47Q8BY87 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Gm9115-201ENSMUST00000120192 1348 ntBASIC19.78■□□□□ 0.76
Usp47Q8BY87 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Usp47Q8BY87 Gm27772-201ENSMUST00000184900 187 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms